Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920827.1_cds_XP_016469891.1_62395
CDS Infomation

[gene=LOC107792213] [db_xref=GeneID:107792213] [protein=E3 ubiquitin-protein ligase ATL31-like] [protein_id=XP_016469891.1] [location=complement(143933..145243)] [gbkey=CDS]
Sequence

ATGGGTAATTCTAGAATTAAGCAGAACTCGTCAGTTTCTGATAATCTGCTCTCTGTGTTC
CTCTTCTCATGTCTATTAGTAATAATTCCCAAAGCAGCGGCACAGCCACAAAATAATCAA
AGTGAGTTTCAATATGCAAAGCTCAATCCACCTTTGGCAATTATCATAATTGTTCTAATT
GCAGCACTCTTTTTCATGGCCGCTTTCTCCGTTTACATCCGACACTGTACTCAGTCCTCT
ACTAGCGGTAGCGTCCGCCGAGCTCTGTCTATGCGTCGCCGTGCTGCTGCGGCGCGTGGA
CTTGATGCAACCGTTATTGAGACTTTTCCGACCTTTACGTATGCTGAAGTGAAGGATCAC
CATATTGGTAAAGGAGCTTTGGAGTGTGCTGTTTGCTTAAACGAGTTTGAAGATGACGAA
ACGCTGCGTTTAATTCCTAAGTGTGATCACGTTTTTCACCCTGAATGTATTGATGCTTGG
CTCCAGTCTCATGATACTTGCCCGGTTTGCCGGGCTAACCTCTCCCCTCAACCCGGTGAA
CCACCGGCCCAAGTTTCCGAGTTGAACCAAGAGGGCCAACAAGATCCGGGAACTGAGCTT
CAACAGCAAAACGATGAAGTTTCGATACGCATAGAGGGTGACGAAGAACAACGAGAACCG
GTTCAGCAGCAACAAGAGGAGGGTTCAGTTAGATCGAGAGTGAAGCGGAATTTGAGCTTC
AACGTGCCGAACCGGGTTCAGAAGCAAGAAGAAGGGGGTTCTTCTAAACCGGGAGTAAAG
AGAAACTTGAGTTTCAACGTGCCGATTCTTTCACCGAGATCATTTTCCATGAAGCCAAGG
ATATTTAGCAAGTTCAGGTCACATTCTACCGGCCACTCAGTAGTAGTACCGGGTGAGAAT
TTGGACCGGTACACTCTAAGGTTACCAGAGGGGATTCGGAAGGAGGTAATGAACCGGGCA
TTATTGAACCGGGCTAAGAGCTTTGGAGTTGCCTTACCAAGAGACGGAAGCTCAAGAAAA
GGGTACAGAACCGGTACTGGAGAGGGAAGCAGCAGGGGTGCTAGGTCTAACAGACGTATC
GATCGGTCCGAACTGGAAGGATATTCGGACCGGTGGGTTTTCACTATTGCACCACCATTC
ATTTCTAGAGGCGCATCAATGAAATCACCAAAAGTTGGAGCTGAAACTGGTGAGGGTTCC
ACCTCTGGAAGTGTGAAAAACGCCGTCAAATTACCGTCGTTTAAATGCTTGGAACCAAAA
GGTGATGAAACCTCTTTGATGTCTGCTGACTCGGCTCGACCTCCGGTTTAG

Peptide Sequence

PEP ID

XP_016469891.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Nicotiana tabacum]
Sequence

MGNSRIKQNSSVSDNLLSVFLFSCLLVIIPKAAAQPQNNQSEFQYAKLNPPLAIIIIVLI
AALFFMAAFSVYIRHCTQSSTSGSVRRALSMRRRAAAARGLDATVIETFPTFTYAEVKDH
HIGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLQSHDTCPVCRANLSPQPGE
PPAQVSELNQEGQQDPGTELQQQNDEVSIRIEGDEEQREPVQQQQEEGSVRSRVKRNLSF
NVPNRVQKQEEGGSSKPGVKRNLSFNVPILSPRSFSMKPRIFSKFRSHSTGHSVVVPGEN
LDRYTLRLPEGIRKEVMNRALLNRAKSFGVALPRDGSSRKGYRTGTGEGSSRGARSNRRI
DRSELEGYSDRWVFTIAPPFISRGASMKSPKVGAETGEGSTSGSVKNAVKLPSFKCLEPK
GDETSLMSADSARPPV

Transcript Sequence

Gene sequence data has not been registered.